CDS
| Accession Number | TCMCG064C33626 |
| gbkey | CDS |
| Protein Id | XP_011100755.1 |
| Location | complement(join(450811..451006,451524..451814,452132..452939,453106..455248)) |
| Gene | LOC105178884 |
| GeneID | 105178884 |
| Organism | Sesamum indicum |
Protein
| Length | 1145aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA268358 |
| db_source | XM_011102453.2 |
| Definition | phytochrome B isoform X1 [Sesamum indicum] |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose- bisphosphate carboxylase, chlorophyll A B binding protein, protochlorophyllide reductase, rRNA, etc. It also controls the expression of its own gene(s) in a negative feedback fashion |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12121
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04712
[VIEW IN KEGG] map04712 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0006996 [VIEW IN EMBL-EBI] GO:0008150 [VIEW IN EMBL-EBI] GO:0009657 [VIEW IN EMBL-EBI] GO:0009658 [VIEW IN EMBL-EBI] GO:0009902 [VIEW IN EMBL-EBI] GO:0009903 [VIEW IN EMBL-EBI] GO:0009987 [VIEW IN EMBL-EBI] GO:0016043 [VIEW IN EMBL-EBI] GO:0019750 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0051179 [VIEW IN EMBL-EBI] GO:0051234 [VIEW IN EMBL-EBI] GO:0051640 [VIEW IN EMBL-EBI] GO:0051641 [VIEW IN EMBL-EBI] GO:0051644 [VIEW IN EMBL-EBI] GO:0051649 [VIEW IN EMBL-EBI] GO:0051656 [VIEW IN EMBL-EBI] GO:0051667 [VIEW IN EMBL-EBI] GO:0071840 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCTACTTCAGGAAGCAGGAGAACTCATGCAAATGATTACTATTCCCAAGCTTTACCTGAAGTTCAAACTCAAGCGCAATCTTCAGGGACAGAGCAAATTCATAGTCTGCATCACCATGCTAACAATAATATTACCAGCATAAACAGGGGTGGTGGCGATTCCATGACCAAAGCTGTAGCGCAGTACACTCTGGATGCAAGACTTCACGCTGTTTTCGAGCAATCTGGTGAGTCTGGAAAATCCTTTGATTATTCACAGAGTATTAGGACTACTAATCAATCTGTTCCCGAGCAGCAGATCACTGCTTATTTGTCCAAAATGCAGCGTGGCGGCCGTATTCAACCCTTTGGTTGTATGATAGCCGTCGATGATTCGAGTTTTCGTGTATTAGCTTACTCCGAGAATGCCCGCGAGATGCTGGGCTTATCGCCTCAGTCGGTCCCAACTCTTCAAAGGCCGGAAATTTTGACTATCGGAACTGATGTTAGAACACTTTTCACCCCCTCCAGCTCTGTTTTGCTGGAGAGGGCATTTGGGGCGCGGGAAATTACATTGTTGAATCCAATTTGGATTCATTCAAAGAATTCAGGGAAACCCTTTTATGCAATTTTGCATAGGATAGATGTAGGGACAGTGATTGATCTAGAGCCTGCCAGGACGGAGGACCCTGCCCTTTCTATTGCTGGCGCTGTCCAGTCGCAGAAGCTTGCAGTTAGGGCTATTTCCCATTTGCAGTCACTCCCTGGTGGGGACATTAAGCTTTTGTGTGATACAGTTGTTGAGAGCGTGAGGGAGTTGACGGGGTATGATCGAGTTATGGTTTATAAGTTTCACGAGGATGAGCACGGTGAGGTTGTGGCAGAGAGCAAGAGACCAGATTTAGAGCCATATATCGGTTTGCATTACCCCAGCACGGATATTCCACAGGCTTCAAGGTTTTTCTTTAGGCAGAATAGAGTTAGGATGATAATGGACTGTCATGCTACCCCCATCAATGTCATTCAGGATGAAGCATTGATGCAGCCTCTGTGTTTAGTAGGTTCAACACTCAGGGCTCCTCATGGTTGCCATGCCCAATACATGGCAAATATGGGGTCAATTGCTTCGTTGACACTTGCTGTTATCATTAATGGAAATGATGAAGATGGCATGCGAGGAAGAAATTTAATGAGGCTATGGGGATTGGTTGTTGGCCATCACACTTCTGCTAGATACATTCCTTTCCCACTTCGTTATGCTTGTGAATTCCTAATGCAGGCATTCGGTCTTCAACTGAAAATGGAATTACAATTGGCATCACAACTGTTGGGGAAACATGTTCTAAGGACACAGACTCTGTTGTGTGATATGCTGCTACGGGATTCACCCACTGGGATTGTTACACAGAGCCCTAGTATCATGGACCTTGTGAAGTGTGATGGGGCTGCACTATACTACCAAGGGAATTATCATCCTCTTGGTGTCACACCTGCTGAAACACAGATAAAGGATATTGTGGAATGGTTGTTGAAGTTCCATGGGGATTCAACAGGTTTGAGTACTGATAGTCTAGCCGATGCTGGTTATCCAGGGGCAGCCACTCTAGGCGATGCGGTTTGTGGAATGGCTGTTGCATTCATCACTTCAAGAGATTTTTTGTTCTGGTTCCGGTCCCATACCGCAAAAGAGATAAAATGGGGTGGTGCAAAGCATCACCCACAGGATAAAGATGATGGTCAGAGAATGCATCCCCGTTCCTCATTCAAGGCGTTTCTCGAGGTGGTCAAGAGTCGAAGTCTGCCATGGGAGAATGCTGAAATAGATGCAATTCATTCTTTGCAGCTGATACTACGAGATTCATTTGGGGATGCTGATGCAGGCAATTCTAATGCAGTTGTACAGGCCCAGGTTCGGAACTTGGAGTTACAACGGATGGATGAACTCAGTTCTGTAGCCAAAGAAATGGTTAGGTTGATCGAGACAGCAACAGCTCCTATTTTTGCTGTAGATGTTGAAGGCCGCATAAACGGGTGGAATGCAAAAGTTGCAGAATTGACTGGACTATCTGTTGAGGAAGCAATGGGAAAGTCCTTGGTTCATGATCTTGTTCACAAAGAATCCGAAGAAATTGCTGATAAGCTTCTGTTTCATGCTCTGGGAGGTGAGGAGGATAAGAATGTTGAATTAAGGTTGAAGACCTTTGGCACTGAAACCAGTAAGAAAGATGTATATGTGGTGGTCAATGCTTGCTCTAGCAAAGACCATACAAACAATATCGTTGGCGTCTGCTTTGTTGGTCAGGATGTAACTGAGCAGAAAGTCGTGATGGACAAGTTCATCCACATTCAAGGTGATTACAAGGCAATTGTACACAGTCCCAACCCTCTGATCCCACCTATATTTGCTTCAGATGAGAACACCTATTGCTCCGAGTGGAACACTGCTATGGAAAAGCTCACCGGTTGGAGTAGAGGGGATATCATTGGGAAGATGTTAGTTGGGGAGATATTTGGAAGTTGTTGTCGGCTCAAGGGTCCAGATGCCATGACAAAGTTCATGATTGTCTTGCACAATGCAATTGGTGGCCAAGATACTGACAAGTTCCCGTTTTCTTTTTTTGACCGAGACGGTAAATATGTGCAAGCTCTTTTGACCGCGAACAAGAGAGCAAATATGGAAGGCCAGATTATAGGAGCCTTTTGCTTCATGCAGATTGCAAGTCCTGAATTGCAGCAAACTCTGACTGTCCAGAGGCAAACTGAAAAGAAGTGTGTTTCAAAGATGAAAGAGCTGGCTTATATTTGTCAGGAGCTAAGAAATCCATTAAGTGGTATCCAGTTTACTAATTCACTCTTGGAAGCCACAAATTTGACAGAAGACCAGAAACAGTTACTTGAAACCACTGCTACTTGTGAGAAGCAAATGTTAAAAATTGTAAAGGACGTTGATCTGGTAAACTTTGAGGATGGTTCAATGGAGCTTGAGAAAGTGGAATTTGTACTTGGGAGTGTAATAGATGCTGTTGTTAGTCAAGTAATGTTATTGCTGAGAGAAAGAGGTCTGCAACTGGTCCGCGATATACCAGAGGAAGTCAAGACCCTGGTTGTCTATGGTGATCAAGTTAGAATTCAACAGATCTTAGCTGATTTCTTACGGAACATGGTGCACCATGCACCATCTCCAGGTTGGGTAGAAATGCAACTTAAACCAAGTCTGAAGCAAATTTCTGACGGTATAACCGTCGCACACAATGAGTTCAGAATTATATGCCCCGGTGAAGGTCTTCCACCCCAACTGGTCCAAGACACGTTTCACAGCAATCGATGGGTGACTCAGGAAGGCCTAGCACTAAGCATGTCCAGAAAATTTTTGAAGCTTATGAATGGAGAAGTTCAATACATCATAGAATCAGAAAGCTGCTATTTCCTTATCATTCTTGAGCTACCTATGCGTTGA |
| Protein: MATSGSRRTHANDYYSQALPEVQTQAQSSGTEQIHSLHHHANNNITSINRGGGDSMTKAVAQYTLDARLHAVFEQSGESGKSFDYSQSIRTTNQSVPEQQITAYLSKMQRGGRIQPFGCMIAVDDSSFRVLAYSENAREMLGLSPQSVPTLQRPEILTIGTDVRTLFTPSSSVLLERAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGTVIDLEPARTEDPALSIAGAVQSQKLAVRAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFFFRQNRVRMIMDCHATPINVIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLTLAVIINGNDEDGMRGRNLMRLWGLVVGHHTSARYIPFPLRYACEFLMQAFGLQLKMELQLASQLLGKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGNYHPLGVTPAETQIKDIVEWLLKFHGDSTGLSTDSLADAGYPGAATLGDAVCGMAVAFITSRDFLFWFRSHTAKEIKWGGAKHHPQDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEIDAIHSLQLILRDSFGDADAGNSNAVVQAQVRNLELQRMDELSSVAKEMVRLIETATAPIFAVDVEGRINGWNAKVAELTGLSVEEAMGKSLVHDLVHKESEEIADKLLFHALGGEEDKNVELRLKTFGTETSKKDVYVVVNACSSKDHTNNIVGVCFVGQDVTEQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTYCSEWNTAMEKLTGWSRGDIIGKMLVGEIFGSCCRLKGPDAMTKFMIVLHNAIGGQDTDKFPFSFFDRDGKYVQALLTANKRANMEGQIIGAFCFMQIASPELQQTLTVQRQTEKKCVSKMKELAYICQELRNPLSGIQFTNSLLEATNLTEDQKQLLETTATCEKQMLKIVKDVDLVNFEDGSMELEKVEFVLGSVIDAVVSQVMLLLRERGLQLVRDIPEEVKTLVVYGDQVRIQQILADFLRNMVHHAPSPGWVEMQLKPSLKQISDGITVAHNEFRIICPGEGLPPQLVQDTFHSNRWVTQEGLALSMSRKFLKLMNGEVQYIIESESCYFLIILELPMR |